|
Home | CV | Databases | IMEG Seminars | MEP-online | People | Publications | Software | Text only version |
|
Appendix |
|
List of H3 Nucleotide Sequences Used |
| Species | Accession | H3Type | Expression* | Species | Accession | H3Type | Expression* |
| Animals | ||||||||
| Human 1 | M26150 | H3.1 | D | Mouse 1 | U62672 | H3.1 | D | |
| 2 | X00090 | H3.1 | D | 2 | M32460 | H3.1 | D | |
| 3 | Z80785 | H3.1 | D | 3 | M32462 | H3.1 | D | |
| 4 | AL009179 | H3.1 | D | 4 | U62670 | H3.1 | D | |
| 5 | Z83735 | H3.1 | D | 5 | X80328 | H3.2 | D | |
| 6 | Z98744 | H3.1 | D | 6 | M33989 | H3.2 | D | |
| 7 | Z83737 | H3.1 | D | 7 | U62669 | H3.2 | D | |
| 8 | Z80786 | H3.1 | D | 8 | M32459 | H3.2 | D | |
| 9 | M60746 | H3.1 | D | 9 | U62671 | H3.2 | D | |
| 10 | X57128 | H3.1 | D | 10 | U62674 | H3.2 | D | |
| 11 | X83550 | H3.1 | D | 11 | M32461 | H3.2 | D | |
| 12 | Z46261 | H3.1 | D | 12 | U62675 | H3.2 | D | |
| 13 | Z80784 | H3.1 | D | 13 | X13605 | H3.3 | I | |
| 14 | Z49861 | H3.1t | T | 14 | Z85979 | H3.3 | I | |
| 15 | Z48950 | H3.3 | I | |||||
| 16 | M11353 | H3.3 | I | Chicken 1 | M61154 | H3.2 | D | |
| 17 | M11354 | H3.3 | I | 2 | X62291 | H3.2 | D | |
| 3 | M61155 | H3.2 | D | |||||
| Shrew Mouse 1 | X80324 | H3.1 | D | 4 | U37579 | H3.2 | D | |
| 2 | X80325 | H3.1 | D | 5 | U37578 | H3.2 | D | |
| 3 | X80326 | H3.2 | D | 6 | X62292 | H3.2 | D | |
| 4 | X80327 | H3.2 | D | 7 | J00869 | H3.2 | D | |
| 8 | Y00392 | H3.3 | I | |||||
| Rat 1 | L19706 | H3.1 | D | 9 | M11393 | H3.3 | I | |
| 2 | X73683 | H3.3 | I | 10 | M11392 | H3.3 | I | |
| Hamster | X80330 | H3.2 | D | Duck 1 | X14732 | H3.2 | D | |
| 2 | M14396 | H3.4 | D | |||||
| Rabbit | X51897 | H3.3 | I | |||||
| Frog 1 | X03018 | H3.2 | D | |||||
| Caenorhabditis elegans II 1 |
Z83245 | H3.6 | D | 2 | M21287 | H3.2 | D | |
| II 2 | Z83245 | H3.6 | D | 3 | X03017 | H3.2 | D | |
| II 3 | Z83245 | H3.6 | D | 4 | M21286 | H3.2 | D | |
| II 4 | Z81495 | H3.6 | D | 5 | X03104 | H3.2 | D | |
| III 1 | Z98866 | H3.3c | I | 6 | X72950 | H3.2a | D | |
| III 2 | Z38112 | ? | P | 7 | X72949 | H3.2b | D | |
| III 3 | Z38112 | ? | P | |||||
| IV 1 | Z73102 | H3.6 | D | C. briggsae 1 | G01B4 | H3.6a | D | |
| IV 2 | Z82271 | H3.6 | D | 2 | G01B4 | H3.6a | D | |
| IV 3 | Z68336 | H3.6 | D | 3 | G41K24 | H3.6a | D | |
| IV 4 | AF047656 | H3.6 | D | 4 | G14F21 | H3.6a | D | |
| IV 5 | U58750 | H3.6 | D | 5 | G45014 | H3.6b | D | |
| V 1 | U64843 | H3.6 | D | |||||
| V 2 | U64843 | H3.6 | D | |||||
| V 3 | U64845 | H3.6 | D | |||||
| V 4 | Z93388 | H3.6 | D | |||||
| V 5 | AC024696 | H3.6 | D | |||||
| V 6 | Z74476 | H3.6 | P | |||||
| X 1 | U28732 | H3.3b | I | |||||
| X 2 | U41625 | ? | P | |||||
| Plants | ||||||||
| Rice 1 | U77296 | H3.5 | D | Alfalfa 1 | X13673 | H3.5b | D | |
| 2 | X13680 | H3.5 | D | 2 | X13674 | H3.5b | D | |
| 3 | AB026295 | H3.5 | D | 3 | U09459 | H3.5b | D | |
| 4 | X13678 | H3.5 | D | 4 | U09465 | H3.5a | I | |
| 5 | AB026295 | H3.5 | D | 5 | U09458 | H3.5a | I | |
| 6 | M15664 | H3.5c | D | 6 | U09464 | H3.5a | I | |
| 7 | U25664 | H3.5c | D | 7 | U09461 | H3.5a | I | |
| 8 | AF093633 | H3.5A | i | 8 | U09460 | H3.5A | I | |
| 9 | AP000559 | H3.5a | I | |||||
| Arabidopsis 1 | AC003114 | H3.5 | D | |||||
| Corn 1 | X84377 | H3.5 | D | 2 | M17130 | H3.5 | D | |
| 2 | M13379 | H3.5 | D | 3 | AL353995 | H3.5 | D | |
| 3 | M35388 | H3.5 | D | 4 | AL161596 | H3.5a | I | |
| 4 | M13378 | H3.5 | D | 5 | AL161596 | H3.5a | I | |
| 5 | M36658 | H3.5 | D | Chlamydomonas 1 | U16825 | H3.5e | D | |
| 2 | U16724 | H3.5d | D | |||||
| Wheat | X00937 | H3.5b | D | 3 | U16725 | H3.5d | D | |
| Rye Grass | X79714 | H3.5a | I | Volvox 1 | X06963 | H3.5d | D | |
| 2 | X06963 | H3.5d | D | |||||
| Porteresia | AF109910 | H3.5a | I | |||||
| Asparagus | X82414 | H3.5 | D | |||||
| Parsley | M77494 | H3.5 | D | |||||
| Sainfoin | AF026803 | H3.5b | D | |||||
| Tomato | X83422 | H3.5a | ||||||
| Cotton | AF024716 | H3.5a | I | |||||
| Tobacco | AB015760 | H3.5a | I | |||||
| Fungi | ||||||||
| Schizosaccharomyces 1 | AL157734 | H3.7 | I | Saccharomyces 1 | X00724 | H3.7a | I | |
| 2 | AL002072 | H3.7 | I | 2 | X00725 | H3.7a | I | |
| 3 | AL096851 | H3.7 | I | |||||
| 4 | AL021766 | H3.7 | I | Aspergillus | U12630 | H3.7c | I | |
| Neurospora | X01612 | H3.7b | I | |||||
| Protists | ||||||||
| Dicyostelium | U76664 | H3.9 | ? | Leishmania. mexicana 1 | AB029444 | H3.11b | I | |
| 2 | AB029444 | H3.11a | I | |||||
| Phreatamoeba | AF140033 | H3.8 | ? | |||||
| L. braziliensis | AF044682 | H3.11 | I | |||||
| Euplotes | U75429 | H3.10 | D | |||||
| L. infantum | X77591 | H3.11c | I | |||||
| Giardia | AF139875 | H3.12 | ? |
|
*D = replication-dependent; I = replication-independent; T = tissue specific; P = potential pseudogene |
|
|
|
Home | CV | Databases | IMEG Seminars | MEP-online | People | Publications | Software | Text only version |
|
|
|
|
Laboratory of Masatoshi Nei | |