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Home | CV | Databases | IMEG Seminars | MEP-online | People | Publications | Software | Text only version |
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Databases |
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This page provides links to various Databases developed by members of the Nei laboratory as well as links to the journal abstracts. Feel free to contact the laboratory of Masatoshi Nei with questions regarding the database information. |
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#mega TITLE: alignment file for figure 7a in Su and Nei 2001 #unitD ------------------------------------------------------------ ---------------------------------ATGAGCCTCGGGCTCCTGTGCTGTGCG GCCTTTTCTCTCCTGTGGGCAGGTGGGTCCTGG-GCAGGGCCC-TTGCGTGGATTTCAAG GCCCATCCCCTTTCCACTGGGGCTGCAGCATCAGTTTTGT---TCTTCTCTGCAGGTCCC GTGAATGCTGGTGTCACTCAGACCCCAAAATTCCACATCCTGAAGACAGGACAGAGCATG ACACTGCAGTGTGCCCAGGATATGAACCATGGATACATGTCCTGGTATCGACAAGACCCA GGCATGGGGCTGAGACTGATTTACTACTCAGCTGCTGCTGGTACTACTGACAAAG---AA GTCCCCAATGGCTACAATGTCTCTAGATTAAACACAGAGGATTTCCCACTCAGGCTGGTG TCGGCTGCTCCCTCCCAGACATCTGTGTACTTGTGTGCCAGCAGTTACTCCACAGCGCTA CAAGGTTGTCTCCTCTCTGCACATAAAGGGAAGTGATGTCACTGTGGGAACTGCCCTGTG GAGACAAGGACATCCCTCATCCTCCGCTCCTGCTCACAGTGACACTGATCTGGTAAAGCC CCCATCCTGGTCTGACACTGTCATGGGTACCAGTCTCCTATGCTGGGTGGTCCTGGGTTT CCTAGGGACAGGTGAGTCCTCAAAACACAAAGTAGTTTCATAT-TTTTTCTGTATGTAGG TGTGTGTGTGTATGCATGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAT GACTACAAATGTTTTCCTTATTCTGTTGCCAGATTCTGTTTCCACAGATCACACAGGTGC TGGAGTCTCCCAGTCTCCCAGGTACAAAGTCACAAAGAGGGGACAGGATGTAACTCTCAG GTGTGATCCAATTTCGAGTCATGCAACCCTTTATTGGTATCAACAGGCCCTGGGGCAGGG CCCAGAGTTTCTGACTTACTTCAATTATGAAGCTCAACCAGACAAATCAGGGCTGCCCAG TGATCGGTTCTCTGCAGAGAGGCCTGAGGGATCCATCTCCACTCTGACGATTCAGCGCAC AGAGCAGCGG-GACTCAGCCATGTATCGCTGTGCCAGCAGCTTAGCCACAGCATGGCACA GTGCTTTTACTTTAGGCTGAGAGATCAGAAGGATCA-CAGTGACATCACAGCATACCCCT CCCATCAGGAAAATCAAGGCCCAGAACTCACTCAGCTCTTTCCCAGGAGGACCAAGCCCT GAAT-CAGGTGCAGTGCTGCCTGCCCCACTGTGCCATGGGCCCCGGGCTCCTCTGCTGGG TGCTGCTTTGTCCCCTAGGAGAAGGTGAGTCC-CGGGCACAGGACAGCTGCTCCATTCTC AGCTT--TCCCACCCCTGTGTCCTCCACTTTACCTTGGGGAGG-ACCTCCAGGCTGTCTC CAGTGCTCATTATACATCTGCTTTTCCCACAGGCCCAGTGGACGCTGGAGTCACCCAAAG TCCCACACACCTGATCAAAACGAGAGGACAGCACGTGACTCTGAGATGCTCTCCTATCTC TGGGCACACCAGTGTGTCCTCGTACCAACAGGCCCTGGGTCAGGGGCCCCAGTTTATCTT TCAGTATTATGAGAAAGAAGAGAGAGGAAGAGGAAACTTCCCTGATCAATTCTCAGGTCA CCAGTTCCCTAACTATAGCTCTGAGCTGAATGTGAACGCCTTGTTGCTAGGGGACTCGGC CCTCTATCTCTGTGCCAGCAGCTTGGCACA------------------------------ ----- #unitC ------------------------------------------------------------ ---------------------------------ATGAGCCTCGGGCTCCTGTGCTGTGTG GCCTTTTCTCTCCTGTGGGCAGGTGGGTCCTGG-GCAGGGCCCCTTGTGTGGATATCAAG GCCCAGCCCCTTTCCACTGGAGCTGTAGCATCAGCTTTGT---CCTTCCCTGCAGGTCCA ATGAATGCTGGTGTCACTCAGACCCCAAAATTCCACGTCCTGAAGACAGGACAGAGCATG ACTCTGCTGTGTGCCCAGGATATGAACCATGAATACATGTATCGGTATCGACAAGACCCA GGCAAGGGGCTGAGGCTGATTTACTACTCAGTTGCTGCTGCTCTCACTGACAAAGGAGAA GTTCCCAATGGCTACAATGTCTCCAGATCAAACACAGAGGATTTCCCCCTCAAGCTGGAG TCAGCTGCTCCCTCTCAGACTTCTGTTTACTTCTGTGCCAGCAGTTACTCCACAGCGCTG CAAGGCTGTCTCCTCTCTGCACATAAAGGGAAGTGATGTCACTGTGGGAACTGCCCTGTG GAGACAAGGACATCCCTCATCCTCTGCTGCTGCTCACAGTGACACTGATCTGGTAAAGCC CTCATCCTGTCCTGACCCTGCCATGGGCACCAGTCTCCTATGCTGGGTGGTCCTGGGTTT CCTAGGGACAGGTGAGTCCTCAGAACACAAAGTAGTTTCATTTTTTTTTCTGTGTGTAGG CGTGTGGGCGTGTG----------TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT GACGACAAATGTTTTCCTTATTCTGTTGCCAAATTCTATTTCCACAGATCACACAGGTGC TGGAGTCTCCCAGTCTCCCAGGTACAAAGTCACAAAGAGGGGACAGGATGTAGCTCTCAG GTGTGATCCAATTTCGGGTCATGTATCCCTTTATTGGTACCGACAGGCCCTGGGGCAGGG CCCAGAGTTTCTGACTTACTTCAATTATGAAGCCCAACAAGACAAATCAGGGCTGCCCAA TGATCGGTTCTCTGCAGAGAGGCCTGAGGGATCCATCTCCACTCTGACGATCCAGCGCAC AGAGCAGCGG-GACTCGGCCATGTATCGCTGTGCCAGCAGCTTAGCCACAGTGTGGCATA GTGCTTTTACTTTAGGCTGAGAGGTCAGAAGGATCAACAGTGACATCACAGGATACCCCT CCCATCAGGAAAATCAAGGCCCAGAACTCACTCGGCTCTTCCCCAGGAGAACCAAGCCCT GAAT-CAGATGCAGTGCTTCCTGTCCCTCTGTGCCATGGGCCCCGGGCTCCTCTGCTGGG CACTGCTTTGTCTCCTGGGAGCAGGTGAGTCC-TGGGCACAGGACAGCAGCCCCATTCTC AGCTT--TCCCACCCCTGTGTCCTCCACTTTACCTTGGGGAGG-ACCTCCAGGCTGTC-C CTGTGCTCATCCTCCATCTGCTTTTCCCACAGGCTTAGTGGACGCTGGAGTCACCCAAAG TCCCACACACCTGATCAAAACGAGAGGACAGCAAGTGACTCTGAGATGCTCTCCTAAGTC TGGGCATGACACTGTGTCCTGGTACCAACAGGCCCTGGGTCAGGGGCCCCAGTTTATCTT TCAGTATTATGAGGAGGAAGAGAGACAGAGAGGCAACTTCCCTGATCGATTCTCAGGTCA CCAGTTCCCTAACTATAGCTCTGAGCTGAATGTGAACGCCTTGTTGCTGGGGGACTCGGC CCTCTATCTCTGTGCCAGCAGCTTGGCACA------------------------------ ----- #unitE ------------------------------------------------------------ ---------------------------------ATGAGCATCGGGCTCCTGTGCTGTGTG GCCTTTTCTCTCCTGTGGGCAGGTGGGTCCTGG--CAGAGCCCCTTGCGTGGATGTCAAG GCCCATCCCCTTTCCACTGGGGCTGCAGCATCAGCTTTGT---TCTTCTCTGCAGGTCCA GTGAATGCTGGTGTCACTCAGACCCCAAAATTCCACATCCTGAAGACAGGACAGAGCATG ACACTGCAGTGTGCCCAGGATATGAACCATGGATACTTGTCCTGGTATCGACAAGACCCA GGCATGGGGCTGAGGCGCATTCATTACTCAGTTGCTGCTGGTATCACTGACAAAGGAGAA GTCCCCGATGGCTACAATGTATCCAGATCAAACACAGAGGATTTCCCGCTCAGGCTGGAG TCAGCTGCTCCCTCCCAGACATCTGTATACTTCTGTGCCAGCAGTTATTCCACAGCGCTG CAAGCCTGTCTCCTCTCTGCACATAAAGGGAAGTGATGTCACTGTGGGAACTGCCCTGTG GAGACAAGGACGGCCCTTATCCTCTGCTTCTGTTCACAGTGACACTGATCTGGTAAAGCC CCCATCCTGGCCTGACCCTGCCATGGGCACCAGGCTCCTCTGCTGGGTGGTCCTGGGTTT CCTAGGGACAGGTGAGTCCTCAGAACACCAAGTAGTTTCAT---TTTTTCTGTTTGTAGG TGTGTGTGTGT----------------GAGAGAGTGGTTGTGTGTGTGTGTGTGTATGAT GACTACAAATATTTTCCTTATTCTGTTGCCAAATTCTATTTCCACAGATCACACAGGTGC TGGAGTCTCCCAGTCCCCTAGGTACAAAGTCGCAAAGAGAGGACAGGATGTAGCTCTCAG GTGTGATCCAATTTCGGGTCATGTATCCCTTTTTTGGTACCAACAGGCCCTGGGGCAGGG GCCAGAGTTTCTGACTTATTTCCAGAATGAAGCTCAACTAGACAAATCGGGGCTGCCCAG TGATCGCTTCTTTGCAGAAAGGCCTGAGGGATCCGTCTCCACTCTGAAGATCCAGCGCAC ACAGCAGGAG-GACTCCGCCGTGTATCTCTGTGCCAGCAGCTTAGCCACAGCATGGCACA GTGCTTTTACTTTAGGCTGAGAGGTCAGAAGGATCA-CAGCGACATCACAGGATACCCCT CCCATCAGGAAAATGAAGGCCCAGAACTCACTCGGCTCTTCCCCAGGAAGACCAAGCCCT GAAT-CAGGTGCAGTGCCGCCTGGCCCACTGTGCCATGGGACCCAGGCTCCTCTTCTGGG CACTGCTTTGTCTCCTCGGAACAGGTGAGTCC-TGGGCACAGGACAGCAGCCCCATTCTC AGCTT--TCCCACCCCAGTGTCCTCCACTTTACCTTGGGGAGG-ACCTCTGGGCTGTCTC CTGAGCTCATCCTCCATCTGCTTTTCCTGCAGGCCCAGTGGAGGCTGGAGTCACACAAAG TCCCACACACCTGATCAAAACGAGAGGACAGCAAGCGACTCTGAGATGCTCTCCTATCTC TGGGCACACCAGTGTGTACTGGTACCAACAGGCCCTGGGTCTGGGCCTCCAGTTCCTCCT TTGGTATGACGAGGGTGAAGAGAGAAACAGAGGAAACTTCCCTCCTAGATTTTCAGGTCG CCAGTTCCCTAATTATAGCTCTGAGCTGAATGTGAACGCCTTGGAGCTGGAGGACTCGGC CCTGTATCTCTGTGCCAGCAGCTTGGCACA------------------------------ ----- #unitA ------------------------------------------------------------ ---------------------------------ATGAGCATCGGCCTCCTGTGCTGTGCA GCCTTGTCTCTCCTGTGGGCAGGTGGGTCCTGG-GCAGAGCCCCTTGTGTGAATTTCAAG GCCCAGCGCCTTCCCATTGGGGCTGCAGCATCAGCTTTGTTCTCCTTCTCTGCAGGTCCA GTGAATGCTGGTGTCACTCAGACCCCAAAATTCCAGGTCCTGAAGACAGGACAGAGCATG ACACTGCAGTGTGCCCAGGATATGAACCATGAATACATGTCCTGGTATCGACAAGACCCA GGCATGGGGCTGAGGCTGATTCATTACTCAGTTGGTGCTGGTATCACTGACCAAGGAGAA GTCCCCAATGGCTACAATGTCTCCAGATCAACCACAGAGGATTTCCCGCTCAGGCTGCTG TCGGCTGCTCCCTCCCAGACATCTGTGTACTTCTGTGCCAGCAGTTACTCCACAGCGCTA CAAGGCCGTCTCCTCTCTGCACATAAAGGGAAGTGATGTCACTGTGGGAACCGCCCTGTG GAGACAAGGACGTCACTCATCCTCTGCTCCTGCTCATAGTGACACTGACCTGGTAAAACC CCCGTCCTGGCCTGACCCTGCCATGGGCACCAGGCTCCTCTGCTGGGTGGTCCTGGGTTT CCTAGGGACAGGTGAGTCCTTAGAACACAAAGTAGTTTCAGTT-TTTTTCTGTGTGTAGG CTTGTGTGTGT----------------------------------------GTGTGCGAT GACTACAAATATTTTCCTTATTCTGTTGCCAAATTCTATTTCCACAGATCACACAGGTGC TGGAGTCTCCCAGTCCCCAAGGTACAAAGTCGCAAAGAGGGGACGGGATGTAGCTCTCAG GTGTGATTCAATTTCGGGTCATGTAACCCTTTATTGGTACCGACAGACCCTGGGGCAGGG CTCAGAGGTTCTGACTTACTCCCAGAGTGATGCTCAACGAGACAAATCAGGGCGGCCCAG TGGTCGGTTCTCTGCAGAGAGGCCTGAGAGATCCGTCTCCACTCTGAAGATCCAGCGCAC AGAGCAGGGG-GACTCAGCTGTGTATCTCTGTGCCAGCAGCTTAGCCACAGCGTGGCACA GTGCTTTTACTTTAGGCTGAGAGGTCAGAAGGGTCA-CAGTGACATCACAGGATACCCCT CCTATTAGGAAAATCAAGGCCCAGAATTCACTCGGCTCTTCCCCAGGAGGACCAAGCCCT GAAT-CAGGTGCAGTGCTGCCTGCCCCACTGTGCCATGGGCCCTGGGCTCCTCTGCTGGG TGCTGCTTTGTCTCCTGGGAGCAGGTGAGTCC-TGGGCACAGGACAGCAGCCCCATTCTC AGCTT--TCCCACCC--ATGTCCTCCACTTTACCTTGGGGAGG-ACCTCCAGGCTTTCTG CTGTGCTCATCCTCCATCTGCTTTTCCCACAGGCTCAGTGGAGACTGGAGTCACCCAAAG TCCCACACACCTGATCAAAACGAGAGGACAGCAAGTGACTCTGAGATGCTCTTCTCAGTC TGGGCACAACACTGTGTCCTGGTACCAACAGGCCCTGGGTCAGGGGCCCCAGTTTATCTT TCAGTATTATAGGGAGGAAGAGAATGGCAGAGGAAACTTCCCTCCTAGATTCTCAGGTCT CCAGTTCCCTAATTATAGCTCTGAGCTGAATGTGAACGCCTTGGAGCTGGACGACTCGGC CCTGTATCTCTGTGCCAGCAGCTTGGCACA------------------------------ ----- #unitB ------------------------------------------------------------ ---------------------------------ATGAGCATCAGCCTCCTGTGCTGTGCA GCCTTTCCTCTCCTGTGGGCAGGTGGGTCCCGG-ACAGGGCCCCTTGCATAGATTTCAAA GCCCAGCCCCTTTCCATTGGGGCTGCAGCATCAGCTGTTT---CCTTCTCTGCAGGTCCA GTGAATGCTGGTGTCACTCAGACCCCAAAATTCCGCATCCTGAAGATAGGACAGAGCATG ACACTGCAGTGTACCCAGGATATGAACCATAACTACATGTACTGGTATCGACAAGACCCA GGCATGGGGCTGAAGCTGATTTATTATTCAGTTGGTGCTGGTATCACTGATAAAGGAGAA GTCCCGAATGGCTACAACGTCTCCAGATCAACCACAGAGGATTTCCCGCTCAGGCTGGAG TTGGCTGCTCCCTCCCAGACATCTGTGTACTTCTGTGCCAGCAGTTACTCCACAGCGCTA CAAGACCATCTCCTCTCTGCACATAAAGGGAAGTGATGTTACTGTGGGAACTGCCCTGTG GAGACAAGGACATTCCTCGTCCTCTGCTCCTGCTCACAGTGACACTGATCTGGTAAAGCC CCCATCCTGGCCTGACCCTGCCATGGGCACCAGGCTCCTCTGCTGGGTGGTCCTGGGTTT CCTAGGGACAGGTGAGTCCTCAGAACATTAAGTAGTTTTATTT-TTTCTCTGTGTGTAGG TGTGTGTGTGT-----------------------T-----TGTGTGTGTGTGTGTGCGAT GACTACAGATGTTTTCCTTATTCTGTTGCCAAATTCTATTTCCACAGATCACACAGGTGC TGGAGTCTCCCAGTCCCCAAGGTACGAAGTCACACAGAGGGGACAGGATGTAGCTCCCAG GTGTGATCCAATTTCGGGTCAGGTAACCCTTTATTGGTACCGACAGACCCTGGGGCAGGG CCAAGAGTTTCTGACTTCCTTCCAGGATGAAACTCAACAAGATAAATCAGGGCTGCTCAG TGATCAATTCTCCACAGAGAGGTCTGAGG-ATCTTTCTCCAC-CTGAAGATCCAGCGCAC AGAGCAAGGGCGACTCGGCTGTGTATCTCTGTGCCAGAAGCTTAGC-ACAGCGTGGCACA GTGCTTTTACTTTAGGCTGAGAGGTCAGAAGGGTCAACAGTGACATCACAGGATACCCCT CCCATCAGGAAAATCAAGGCTCAGAACTCACTGGGTTCTTCCCCAGGAGGACCAAGCCCT GAAT-CAGGTGCAGTGCTGCCTGCCCCACTGTGCCATGGGCCCTGGGCTCCTCTGCTGGG TGCTGCTTTGTCTCCTGGGAGCAGGTGAGTCC-TGGGCACAGGACAGCAGCCCCATTCTC AGCTT--TTCCACCC--GTGTCCTCCACTTTACCATGGAGAAG-ACCTCCAGGCTGTCTC CTGAGCTCATCCTCCATCTGCTTTTCCCACAGGCCCAGTGGACGCTGGAGTCACCCAAAG TCCCACACACCTGATCAAAACGAGAGGACAGCAAGTGACTCTGAGATGCTCTCCTATCTC TGGGCACAAGAGTGTGTCCTGGTACCAACAGGTCCTGGGTCAGGGGCCCCAGTTTATCTT TCAGTATTATGAGAAAGAAGAGAGAGGAAGAGGAAACTTCCCTGATCGATTCTCAGCTCG CCAGTTCCCTAACTATAGCTCTGAGCTGAATGTGAACGCCTTGTTGCTGGGGGACTCGGC CCTGTATCTCTGTGCCAGCAGCTTGGCACA------------------------------ ----- #outgroup AGAATGAGGTCTCAGGATGACTTCCTTGACAGCCCTGTTCGCCTTTCATCAACACACAGA CCCAGAAGACCTCTCTGTCTTGTAGCATCTGCCATGAGAATCAGGCTCCTGTGCTGTGTG GCCTTTTCTCTCCTGTGGGCAGGTAAGTCCTGG-GCAGGGCCC-ATGTGTAGATTTCAAG ACCCAGAGCCTTCCCATTGAGGCTGCAGCATTGGCTTTGTTCTCCTTCTCTGTAGGTCCA GTGATTGCTGGGATCACCCAGGCACCAACATCTCAGATCCTGGCAGCAGGACGGCGCATG ACACTGAGATGTACCCAGGATATGAGACATAATGCCATGTACTGGTATAGACAAGATCTA GGACTGGGGCTAAGGCTCATCCATTATTCAAATACTGCAGGTACCACTGGCAAAGGAGAA GTCCCTGATGGTTATAGTGTCTCCAGAGCAAACACAGATGATTTCCCCCTCACGTTGGCG TCTGCTGTACCCTCTCAGACATCTGTGTACTTCTGTGCCAGCAGTGACTCCACAGTGCTG CACAGCCATCTCCTCTCTGTACATAAATGTCAGTGATGTCACTGTGGGAACTGCTCTGTG GCGACAAGGACGTCCCTCATCCTCTGCTCCTGCTCACAGTGACCCTGATCTGGTAAAGCT CCCATCCTGCCCTGACCCTGCCATGGGCACCAGCCTCCTCTGCTGGATGGCCCTGTGTCT CCTGGGGGCAGGTGAGTCCTCAGAACACCAAGCAATCTCAT-TGTGTCTGTGTATGTCTG TGTGTGTGTGC--------------------------GTGTGTGTGTGTGTGTGTGTGAT GACTACAATTGTTTTCCTC---CTGTTCCCAACTTGTATCTCCACAGATCACGCAGATAC TGGAGTCTCCCAGAACCCCAGACACAAGATCACAAAGAGGGGACAGAATGTAACTTTCAG GTGTGATCCAATTTCTGAACACAACCGCCTTTATTGGTACCGACAGACCCTGGGGCAGGG CCCAGAGTTTCTGACTTACTTCCAGAATGAAGCTCAACTAGAAAAATCAAGGCTGCTCAG TGATCGGTTCTCTGCAGAGAGGCCTAAGGGATCTTTCTCCACCTTGGAGATCCAGCGCAC AGAGCAGGGG-GACTCGGCCATGTATCTCTGTGCCAGCAGCTTAGCCACAGCATGGCACA GT-CGCCTCCTTCCTGCT-------CACAA--ACCA-CAGTGACATCACAGTATGCCCCT CCCACCAGGAAAAGCAAGGCTGAGAATTTA----GCTCTTTCCCAGGAGGACCAAGCCCT GAGCACAGACACAGTGCTGCCTGCCCCTTTGTGCCATGGGCTCCAGGCTGCTCTGTTGGG TGCTGCTTTGTCTCCTGGGAGCAGGTGAGTCCCTGCAGACAGGATAGC-GCCCCATTCTG AGCCTGTCCTCACCCCTGTGTCTTCCACTTTACCATGGGGAGGCACCACCAGGCTGTCTC CGGTGCTCATTCTCCATCTGCTTTTCCCACAGGCCCAGTAAAGGCTGGAGTCACTCAAAC TCCAAGATATCTGATCAAAACGAGAGGACAGCAAGTGACACTGAGCTGCTCCCCTATCTC TGGGCATAGGAGTGTATCCTGGTACCAACAGACCCCAGGACAGGGCCTTCAGTTCCTCTT TGAATACTTCAGTGAGACACAGAGAAACAAAGGAAACTTCCCTGGTCGATTCTCAGGGCG CCAGTTCTCTAACTCTCGCTCTGAGATGAATGTGAGCACCTTGGAGCTGGGGGACTCGGC CCTTTATCTTTGCGCCAGCAGCTTGGCACAGCCCTACAAAGCCAACCACATTCTGTGCAC AAACC |
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Laboratory of Masatoshi Nei | |
